© Leibniz-Institut für Polymerforschung Dresden

Mission Statement

The Harmon lab studies the basic principles of biomolecular condensates.  The main focus is the thermodynamics of formation and the impact of incorporating enzymes into droplets.  The goal is to build an understanding of how chemically active droplets can be integrated into cellular signaling networks.

Research Focus

Thermodynamically driven droplets

  • Connecting polymer features to their emergent droplet features
  • Connecting sequence level features to the polymer features
  • Designing proteins for tuning droplet features

 

Chemically active droplets

  • Examining the impact of droplets on reactions for cells
  • Energy dependent bifurcations in droplet state
  • Critical behavior that induces hysteresis in droplet concentrations
  • Connecting activity in droplets to cell regulation and cell signaling

 

Techniques

  • Monte Carlo polymer lattice
  • Monte Carlo all-atom protein simulations
  • Molecular dynamics coarse-grained simulations
  • Cahn Hilliard
  • Reaction-diffusion equations
  • Effective droplet models

Current news by this research group

Molecular Assembly Lines in Active Droplets

  Cells assemble structures that have lots of molecules. How can such complicated structures be reliably assembled? We propose that cells could be organizing an assembly line process for the construction. We show how this could be organized inside droplets. In this video we explain our recent…

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Join us as a Masters or PhD student: Chemical reactions in lattice polymer models

Required experience in the following methods: Statistical physics, molecular dynamics, monte carlo, lattice simulations Work with: Dr. Tyler Harmon | Tel: +49 (351) 4658 1216 | Email: TylerHarmon@ipfdd.de Prof. Dr. Jens-Uwe Sommer | Tel: +49 (351) 4658 750 | Email: Sommer@ipfdd.de……

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Join us as a Masters or PhD student: Surfactants stabilizing surfaces of cellular droplets

Required experience in the following methods: Statistical physics, molecular dynamics, monte carlo, lattice simulations Work with: Dr. Tyler Harmon | Tel: +49 (351) 4658 1216 | Email: TylerHarmon@ipfdd.de Prof. Dr. Jens-Uwe Sommer | Tel: +49 (351) 4658 750 | Email: Sommer@ipfdd.de……

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Join us as a Masters or PhD student: Mechanisms for storing memory in cellular droplets

Required experience in the following methods: statistical physics, 3D reaction diffusion models, critical behavior around bifurcations Work with: Dr. Tyler Harmon | Tel: +49 (351) 4658 1216 | Email: TylerHarmon@ipfdd.de Prof. Dr. Jens-Uwe Sommer | Tel: +49 (351) 4658 750 | Email:…

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New Study: A multi-step nucleation process determines the kinetics of prion-like domain phase separation

In this study, time-resolved small-angle X-ray scattering (SAXS) was used to characterize liquid-liquid phase separation of Prion-like domains. Read more

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