Portrait from Miki Ebisuya
© TUD CMCB, Magdalena Gonciarz

Expertise

The Ebisuya group has a strong expertise in stem cell and developmental biology, focusing on fundamental questions such as why different animal species exhibit varying biological times. Utilizing stem cell-based models, they have made significant strides in this field. Notably, they have successfully recapitulated the developmental timing mechanism known as the segmentation clock using stem cells from a wide range of mammalian species, including mice, humans, rabbits, cows, marmosets, and even rhinoceroses1,2,3,4. Through this innovative “stem cell zoo” platform, they demonstrated that cells from each species retain their distinct developmental tempo and biochemical kinetics in vitro. Currently, the team is investigating species-specific distributions of biomolecular condensates and their role in shaping these unique developmental tempos.

References:

  1. Matsuda et al. Species-specific segmentation clock periods are due to differential biochemical reaction speeds. Science. 2020;369(6510):1450-1455. https://doi.org/10.1126/science.aba7668
  2. Lázaro et al. A stem cell zoo uncovers intracellular scaling of developmental tempo across mammals. Cell Stem Cell. 2023;30(7):938-949.e7. https://doi.org/10.1016/j.stem.2023.05.014
  3. Matsuda et al. Recapitu-lating the human segmentation clock with pluripotent stem cells. Nature. 2020;580(7801):124-129. https://doi.org/10.1038/s41586-020-2144-9
  4. Sanaki-Matsumiya et al. Periodic formation of epithelial somites from human pluripotent stem cells. Nat Commun. 2022;13(1):2325. https://doi.org/10.1038/s41467-022-29967-1

Current news by this research group

New Study – In vitro binding energies capture Klf4 occupancy across the human genome

While transcription factors (TFs) bind genomic DNA at specific positions to control gene expression, it is unclear which parameters dictate the low-affinity binding of TFs to non-motif sequences despite their importance. Can we develop a model to robustly predict transcription factor binding on…

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Alberti and Hyman among Clarivate’s Highly Cited Researchers in 2025

  RTG 3120 PI's have been among the most highly cited authors in 2025, according to Clarivate. The Hyman and Alberti groups lead the way "in the top 1% by citations for their field(s) and publication year in the Web of Science Core Collection" See the press release by TU Dresden:…

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New Research Training Group for Biomolecular Condensates in Dresden

The DFG approved a funding application to establish a new Research Training Group (RTG 3120) in Dresden to train PhD students interdisciplinary methods and approaches to study Biomolecular Condensates. Read the press releases for more:…

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